Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSEFFSTLLLIIGLLIGFFLAILLILAGIRRFFCSAEEPLKRIRRYQVWHNRYQFNEEVTSFFTVIGATLLVSLITVQITAIPFQYTVLIFWSSWLFHLLSFWKKIRVPKKMKNEMIQLAGFLLITALYFVGYFAMKSLHFSIIHVADFPGVIQFGIRTYLTICSLFVASGALIVWQRIYVKLLK
2X5H Chain:A ((1-92))
------------------------------------GMASLKEIID-ELGKQAKEQNKIASRIMKIKGIKRIVVQLNAVPQDGKIRYSMTIHSQN------NFRKQIGITPQDAEDLKLIAEFLEKYSDFLNEYV---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2X5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48058 for 498 contacts (-96.5/contact) +
2D Compatibility (PS) -10274 + (NN) -2692 + (LL) 10044
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -53330.0 ( -107.09 by residue)
QMean score : 0.203
(partial model without unconserved sides chains):
PDB file :
Tito_2X5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X5H-query.scw
PDB file :
Tito_Scwrl_2X5H.pdb
: