Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADSKSFTFELNESVLTAQVGRLDEMAMVVEQRFSELKMTIEDVGNADPGSKISESLGGLQSGLGTISSAFGQLGSSSEAITSGFGTAVGSVGGITDAFKNLGSSVQNGTLFSSLATGIGGMSTMLGGVSGGVQGITNLASGFMELKNHLGGLMSSIGGVGGIMGKLTSPMGLVIIGIVALVAAFAYLMTTNESFRNTVMSVVTQVAQLFGQLVASLMPIIMQIVTAVMQIGAALMPMVMQFISFFAQLLAQLMPFINMLISMLMPVIMQIVQVVMSLVSALLPSIMTVIQGIMSVIQFLIPIIMQIATVVVQIVVTIISYISKIMPIVMTIIGVIVSIITTIISYVVIIATTIASVIGKIISFIASVITAVIGIVQPIIAFITNIFTTIVTIIGAAFQMVFTVASKIWNSIMSTISGIIDGIKAVITGISTTVSSVFN--------GVKRIITGVFDGIKSAWGGLTDFVGNIFDGVSSAIQTVVDNVKGFVNVVIRGINGAIGLINKIPGV--EIGKIPQLISGTTN-FQGGFARMNEGGRGEMVVLPSGSQVIPHDATMKYARESARGNKSMLYTSQGADLARVENLLERLLQKNPVIKMDDKVVAEVVSRNQANSFDQYNYTMGGAAYS |
| 2AQH Chain:A ((2-119)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGLLDGKRILVSGIITDSSVAFHIARVAQEQGAQLVLTG-FDRLR-----LIQRITDRLPAKAPLLELDVQNEEHLASLAGR-VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKG-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38023 for 667 contacts (-57.0/contact) +
2D Compatibility (PS) -11643 + (NN) -2080 + (LL) 42500
1D Compatibility (HY) -4000 + (ID) 1600
Total energy: -14846.0 ( -22.26 by residue)
QMean score : 0.112
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