Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTEIKRMLQTKEDNSKEQFYPETHVAGIVGLTEYVSGQLPTGVVSVNGKAGRVLLDAEDVHAAKKSHTHEVATYTTDGFMSSFDKQKIDQLVSPEAGVTSINGKTGIVDLFASDLDAAEINHTHAEATTTESGFLSIDDKEKLDAIQVIALETIKEVIE---- |
2JTD Chain:A ((1-122)) | EEEMKRLLAL----SQEHKFPTVPTK-----SELAVEILEKGQVRFWMQAEKLSSNAKVSYIFNEKEIFEGPKY----------KMHIDR-------------NTGIIEMFMEKLQDEDEG---------TYTFQIQDGKATGHSTLVLIGDVYKKLQKEAEF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JTD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23715 for 779 contacts (30.4/contact) +
2D Compatibility (PS) -11835 + (NN) 1808 + (LL) 1568
1D Compatibility (HY) -2000 + (ID) 1400
Total energy: 11856.0 ( 15.22 by residue)
QMean score : 0.168
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