Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMNPDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLVGTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLGWLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGYAKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIFQLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG |
1QBF Chain:A ((11-21)) | -----------------------------------------DASPEELSRYY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QBF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1064 for 38 contacts (28.0/contact) +
2D Compatibility (PS) -1150 + (NN) -1765 + (LL) 24912
1D Compatibility (HY) -400 + (ID) 150
Total energy: 22511.0 ( 592.39 by residue)
QMean score : -0.055
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