Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEQEIIEKVEILPNNFSENDSIYISQENIKNLVLFSKENQTVLELLITPFLICVNSGLKYELHYYEISTEISKNDTEIIGFPFGNKLPKEITDNISPKLFVRREDYSAFENFLSQYFNAMKSMGFADDKQAIGMIEHGATLFYEVL
1VEJ Chain:A ((30-53))
------------------------------------------------------------------------------------------------------------------QQELEELKALGFANRDANLQALVA---------
General information:
TITO was launched using:
RESULT:
Template:
1VEJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5607 for 122 contacts (-46.0/contact) +
2D Compatibility (PS) -2541 + (NN) -712 + (LL) 9136
1D Compatibility (HY) -1600 + (ID) 250
Total energy: -1574.0 ( -12.90 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_1VEJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VEJ-query.scw
PDB file :
Tito_Scwrl_1VEJ.pdb
: