Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LKIKKILPQTIKSEVYFIDEIKNFDIVTEKMNDNFYTYRLGSNVMMWLNDEGVIGEIECIFPAQIDNLITLWEEKNTVVQNGFPMIDTDIVENKTFIPKVRIFNH-GDYFIL---------YFSNMYKYNKEIISENLTFYAKDTELIAIKAELT
2ID0 Chain:A ((170-261))
--------------------------------------------------------LEKEAPDGVATEMLD-EGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGF----------
General information:
TITO was launched using:
RESULT:
Template:
2ID0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10022 for 293 contacts (-34.2/contact) +
2D Compatibility (PS) -8124 + (NN) 782 + (LL) 5744
1D Compatibility (HY) 1600 + (ID) 500
Total energy: -10520.0 ( -35.90 by residue)
QMean score : -0.018
(partial model without unconserved sides chains):
PDB file :
Tito_2ID0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ID0-query.scw
PDB file :
Tito_Scwrl_2ID0.pdb
: