Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKVRISVRRLVEFVRRSGSIDNRMTSSDRALEGTKIHQLLQKEAGEEYAAEVRLNLDRIVDGIAFSLDGRADGIINGRMIDEIKTTETPMDEITENFRPLHWAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYAIWAKASAAWEMKRNKTIQELTFPYDSYRSGQRELAIAVYRTISSEESLFCEAPTGIGKTMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKICFLDERKC--EPDHCQFARGYYDRLNEALFDMLQSEEAITRQVVESYARKYTLCPFELSLDVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKKSAVMQVKRGLDAKNNKRLLNAINVMNKDMIALNKKLKDLDGTIYVQKNELIDWNESVLKFTFVAKEWLPQNTQ-SEIQADVLELYFESLRYVAIADFYDDRYVTQVTKSHGDLEIKQVCLDPSFLLSERLKLGSSSVLFSATLRPIDYYTNLLGGQEDTSRMIFSSPFKQ---KNMHLLVADYISTKYQMREN-SMEAVVDALYALVSGENGNYLFFFPSFLYLQKVYDLFKEKYPNIRLQKQETAMDEERREHFLERFQAENVETLIGFCVLGGVFSEGVDLRGNR---LVGAAVVGVGLAQLNHESDLIKDYYNET-IGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIEERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS |
| 3CRV Chain:A ((3-546)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLRDWQEKLKDKVIEGLRNNFLVALNAPTGSGKTLFSLLVSLE-----VKPKVLFVVRTHNEFYPIYRDLTKIRE-KRNITFSFLVGKPSSCLYAEKGAESEDIPCKYCELKGS-IVEV---KTDDSPLSLVKKLKKDGLQDKFCPYYSLLNSLYKADVIALTYPYFFIDRYREF--IDIDLREYMIVIDEAHNLDKV-NELEERSLSEITIQMAIKQSKSEE---SRRILSKLLNQLREVVLPDEK----YIKVENVPKLSKEELEILADDYEDIRKDSLKQGKVNK---IHIGSILRFFSLLSI--GSFIPFSY----SKRLVIKNPEISYYLNLLNDNELSIILMSGTLPPREYMEKVWGIKRNMLYLDVEREIQKRVSGSYECYIGVDVTSKYDMRSDNMWKRYADYLLKIYFQAKANVLVVFPSYEIMDRVMSRISL-----PKYVESE---DSSVEDLYSAISAN--NKVLIGSVGKGKLAEGIELRNNDRSLISDVVIVGIPYPPPDDYLKILAQRVSLKMNRENEEFLFKIPALVTIKQAIGRAIRDVNDKCNVWLLDKRFES-LYWKKNLKCLNA--------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -252493 for 4394 contacts (-57.5/contact) +
2D Compatibility (PS) -56079 + (NN) -11077 + (LL) 18644
1D Compatibility (HY) -24400 + (ID) 4450
Total energy: -329855.0 ( -75.07 by residue)
QMean score : 0.379
|
|
|