Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKASEHFFYVLKCS-DNSYYGGYTTDVLRREAEHNAGI--R----CKY---TKTR-RPVKVIHFEKFET-RSEATKAEAAFKKLSRKNKDAYLIQREEESE
1MK0 Chain:A ((2-80))
-----KSGIYQIKNTLNNKVYVGSAKDFEKRWKRHFKDLEKGCHSSIKLQRSFNKHGNVFECSILEEIPYEKDLIIERANFWIK------------------
General information:
TITO was launched using:
RESULT:
Template:
1MK0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10618 for 402 contacts (-26.4/contact) +
2D Compatibility (PS) -7583 + (NN) -5330 + (LL) 1976
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -25305.0 ( -62.95 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1MK0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MK0-query.scw
PDB file :
Tito_Scwrl_1MK0.pdb
: