Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LIMNANLEVNAELVKESYVYLLSRYLVLRQENFDTKEDKIPYNTLKHNSVSPADANFVNPNFDVVYSEAWIAVDDEHAVVLEVPEIKNRYYTVQLLDGWGEVVTNINERNFPEHPHGKFAFVKKGTNPSIPSDAIKIELPSEKVKVLLRVEQKDDPEGAVKLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPKAAEFQDKARKVAAYIELGDDQKAEVRNLIVKEALPYFTNGAKGFGTQKGGWSVTYVAGAFENDILARAIINYGGIWANSIQEALYFIGQKGTDDELLTGDKIYKIHFSADELPAELANAFWSVTLYSVPDYHVIPNELNKFCINNYTGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAGKEFSLNFRLYVPKKEVLEGKVFLPPLEVF |
| 2LX9 Chain:A ((19-37)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SP-AYRQKLLSLGMLPGSSF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LX9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1668 for 58 contacts (28.8/contact) +
2D Compatibility (PS) -2041 + (NN) -782 + (LL) 25428
1D Compatibility (HY) -400 + (ID) 50
Total energy: 23823.0 ( 410.74 by residue)
QMean score : 0.386
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