Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDITIVNAGEKIESRTHAKTVSEALDEAGIKVSERDEIAPGKNAEIKDGMEIKYLPARQITINDNGTKKDVWSTKANVADLLKDENITTRPQDVLNVALDTKLKNGLEVNINRAIQLSLQN--GAKKDTVWTTKTKVSDLLAEKNIKLDQDDRVSPAKDSNLKEKMTVEVTYVNSKAEKKNEQVKFETVYKEDDS--LNKGVEKVVQEGKN-GKKVV------EYKVTFENGKEKKRDVIKENVTSNKTDKVVVRGTKEKVVATPVSNVSTSSATSSSSSSASSTPSGGKTYKMESTAYSGGGTTAYGINLSANPGLKVIAVDPRIIPLGSKVWVEGYGEAIAGDTGGAIKGNIVDVYFPNESQCYSWGRRMVTVKVLN |
1XZP Chain:A ((158-298)) | ----------------------------------------------------------------------------------------------------------------------------------------------VRDLIEAKSETSLKLSLRNLKGGLRDFVDSLRRELIEVLAEIRVELDYPDEI----ETNTGEV----VTRLERIKEKLTEELK-----KADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISE--------EIVIRGILFRIVDT------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 50658 for 682 contacts (74.3/contact) +
2D Compatibility (PS) -13955 + (NN) -4104 + (LL) 15452
1D Compatibility (HY) -8000 + (ID) 2100
Total energy: 37951.0 ( 55.65 by residue)
QMean score : 0.337
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