Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGK---VKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGM----TADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS |
| 3FEY Chain:A ((152-280)) | -----------------------------------------------------------------------FVSVTQEEDVPQVRRDWYVYAFLSSLP---WVGKELYEKKDAEMDRIFANTESY-----LKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRP---------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3FEY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 6523 for 519 contacts (12.6/contact) +
2D Compatibility (PS) -9419 + (NN) 819 + (LL) 8864
1D Compatibility (HY) -1600 + (ID) 1350
Total energy: 3837.0 ( 7.39 by residue)
QMean score : 0.106
|
|
|