Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------MNVLQSMKMAWKQLKASKLR--SFLTMLGIIIG---------VASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGF---GDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIP---ISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKK--RAILLQFLIES---IVISVCGGVIGIIIGVSGALIFGSVAG-ISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE |
4CZB Chain:A ((1-415)) | MELMMAIGYLGLALVLGSLVAKIAEKLKIPDIPLLLLLGLIIGPFLQIIPSDSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYLFGAITAATDPATLIPVFSRVRTN--PEVAITLEAESIFNDPLGIVSTSVILGLFGLFSSSNPLIDLITLAGGAIVVGLLLAKIYEKIIIHCDFHEYVAPLVLGGAMLLLYVGDD-----LLPSICGYGFSGYMAVAIMGLYLGDALFRADD-------IDYKYI-VSFCDDLSLLARVFIFVFLGACIKLSMLENYFIPGLLVALGSIFLARPLGVFLGLIGSKHSFKEKLYFALEGPRGVVPAALAVTVGIEILKNADKIPASITKYITPTDIAGTIIIGTFMTILLSVILEASWAGMLAL-----KLLGE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CZB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107841 for 3326 contacts (-32.4/contact) +
2D Compatibility (PS) -38891 + (NN) 1119 + (LL) 1524
1D Compatibility (HY) -21200 + (ID) 3500
Total energy: -168789.0 ( -50.75 by residue)
QMean score : 0.158
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