Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLP-EAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK |
2DB0 Chain:A ((146-222)) | -------------------------------------------------------------------------------------------------------------------VRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLATLNDKLRKVVIKR--------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2DB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -16766 for 506 contacts (-33.1/contact) +
2D Compatibility (PS) -7585 + (NN) 477 + (LL) 10176
1D Compatibility (HY) -1600 + (ID) 500
Total energy: -15798.0 ( -31.22 by residue)
QMean score : 0.410
|
|
|