Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
1U43 Chain:A ((1-155))
-MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLI-
General information:
TITO was launched using:
RESULT:
Template:
1U43.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111736 for 1333 contacts (-83.8/contact) +
2D Compatibility (PS) -16943 + (NN) -10158 + (LL) 272
1D Compatibility (HY) -14000 + (ID) 4800
Total energy: -157365.0 ( -118.05 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_1U43.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1U43-query.scw
PDB file :
Tito_Scwrl_1U43.pdb
: