Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEF--KTTDFDEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETDTRKIAFEKTLQLLKMVNPAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL
3HRG Chain:A ((159-202))
------------------------------NSKKMYASVRK-DAIDIYCFERGQLLLANSFECMQTEDRIYYLLY-----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6581 for 195 contacts (-33.7/contact) +
2D Compatibility (PS) -4438 + (NN) -1609 + (LL) 9056
1D Compatibility (HY) -2000 + (ID) 250
Total energy: -5822.0 ( -29.86 by residue)
QMean score : 0.395
(partial model without unconserved sides chains):
PDB file :
Tito_3HRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HRG-query.scw
PDB file :
Tito_Scwrl_3HRG.pdb
: