Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VFIHGFQEEVGNLWQETLRHPFVRSLADGTLEKEAFYYYLLQDDYYLSHFEKVIEKSVEQAGTAELAAEMREVQVRLQQSELLMREQFYPRVGLTERDFSERKPAPTAYHYTSHLHRMVDFGSFGVTIAALLPCYALYADIGK----MYEGARSSE-------PFYQELLDSYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWRGSVNYV
1Z72 Chain:A ((28-223))
-------------WQAAINHRFVKELFAGTIENKVLKDYLIQDYHFFDAFLSMLGACVAHADKLESKLRFAKQLGFLEADEDGYFQKAFKELKVAENDYLEVTLHPVTKAFQDLMYSAVASSDYAHLLVMLVIAEGLYLDWGSKDLALPEVYIHSEWINLHRGPFFAEWVQFLVDE-LNRVGK-REDLTE-------------LQQRWNQAVALELAFFDIGY------------
General information:
TITO was launched using:
RESULT:
Template:
1Z72.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89878 for 1366 contacts (-65.8/contact) +
2D Compatibility (PS) -19518 + (NN) -3494 + (LL) 3136
1D Compatibility (HY) -12800 + (ID) 2450
Total energy: -125004.0 ( -91.51 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_1Z72.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z72-query.scw
PDB file :
Tito_Scwrl_1Z72.pdb
: