Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGTNAIMIADNIATCTNSEHIYIFCDIGSAILSAETALELLDTDLLEKTTIIDAPLVEGAFTAAVQSLVNPSKEAILQELTNVH
1YUB Chain:A ((31-86))
--------------------------DTVYEI---GTGKGHLTTKLAKISKQVTSIELDSHLF---NLSSEKLKLNTRVTLIHQDILQ-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1YUB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34246 for 341 contacts (-100.4/contact) +
2D Compatibility (PS) -5882 + (NN) 821 + (LL) 6132
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -38475.0 ( -112.83 by residue)
QMean score : 0.118
(partial model without unconserved sides chains):
PDB file :
Tito_1YUB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YUB-query.scw
PDB file :
Tito_Scwrl_1YUB.pdb
: