Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLKKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFT-EIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSR-EAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTKAGETFQAQAYKTKVLKTFGAGDSYASAFLYGLFSDESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE |
| 4DU5 Chain:A ((27-333)) | ----------LDVITFGEAMMLLVA-DRPGPLEHAEAFHKRTAGAETNVAIGLARLGLKVGWASRLGTDSMGRYLLAAMAAEGIDCSHVVCDAT-QKTGFQFKGKVTDG--PPVEYHRKGSAASHMGVADIDEAWLLSARHLHATGVFPAISATTLPAARKTMDLMRAAGRSVSFDPNLRPTLWATPELMRDAINDLATRADWVLPGMEEGRFLTGET--TPEGVARFYRQLGAKLVVVKLGAEGAYFDGEAGSGRVAGFP-------VGAGDGFAVGVISALLDGLGVPEAVKRGAWIGARAVQ------GLPTRAELNA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DU5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157518 for 2552 contacts (-61.7/contact) +
2D Compatibility (PS) -31060 + (NN) -8606 + (LL) 1924
1D Compatibility (HY) -10000 + (ID) 4200
Total energy: -209460.0 ( -82.08 by residue)
QMean score : 0.493
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