Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQPRPNLRSMHQAS---RTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRESDVAKGKNIIKSTSSHQKKARKLRGRLQEAIITKEILDKPVSLRKNHL |
2W0C Chain:T ((1-127)) | ------MANFLTKNFVWILAAGVGVWFYQKADNAAKTATKPIADFLAELQFLVNGSNYVKFPNAGFVLTRDALQDDFIAYDDRIKAWLGTHDRHKDFLAEIL----------------DHERRVKPVYRKLIGNIIDASTIRAASGVEL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 35779 for 527 contacts (67.9/contact) +
2D Compatibility (PS) -12659 + (NN) 637 + (LL) 1256
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: 18013.0 ( 34.18 by residue)
QMean score : 0.144
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