Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGEDEGEQTKTKKDSNKVVKTASRPKLSTKDLALIKADLAEFEARELSSEKILKDTIKEESWSDLDFANDNINQMIGTMKRYQQEILSIDAIK-RSS-----EASADTEAFKKIFKEWSEFKIERIQVTIDLLNGKKDSEAVFKKTYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK |
2JEK Chain:A ((100-144)) | ------------------------------------------------------------------------------------------------------------------------PDDLKLCSSMTLFARATDANQDFVALLAKY--YGGGEDRRTVALLAV-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -4151 for 170 contacts (-24.4/contact) +
2D Compatibility (PS) -4028 + (NN) -495 + (LL) 13140
1D Compatibility (HY) -2000 + (ID) 450
Total energy: 2016.0 ( 11.86 by residue)
QMean score : 0.305
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