Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEKTIMERRSIKKANDEPISRETVNTILEQAAYAPFHSKVEPWNVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLKAGYAKKII-TPPYLLIVTTNIIGHGKKDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFI-FDAKFADDLGIPAEQKIVGTL---HLTSLAEVPEAKPRRPLNEWVKNLADL
4TTB Chain:A ((69-254))
-------KRRSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEIN---------------NWIKEYLDTAPILILIFKQV----------YNEISVSIACGILLAALQNAGLVTVTTTPLNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDLK-RKPLDQ--------
General information:
TITO was launched using:
RESULT:
Template:
4TTB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64065 for 1040 contacts (-61.6/contact) +
2D Compatibility (PS) -15975 + (NN) -6646 + (LL) 3044
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -93542.0 ( -89.94 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_4TTB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TTB-query.scw
PDB file :
Tito_Scwrl_4TTB.pdb
: