Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSVMWFRRDLRVNDNKALYHACKEDDLLLLFQVNPAQFITGSPSHQAFFASVAHFKQEV--DKTALLQIMFGEPVECLKQLKETLPSWDKVYFNRDETGYGAERDEAAKTFFDEQEIEVQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKETPFKVTLKADNIRKENLFPKYEEQFAEMTCDLPILDSGEKTANTRLANFIKHDVADYDKARDFPELDKTSHLSRYLRTGEISVR-TIWQALQENEATEGRAIFEKELCWRDF-YNMIYVSFPNQKNEPIQENYRFIEWENNREFFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMVTASFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQKFDPTGKFIRKYVKELANLPDKFIHQPEKMSEIEQKEYGLLLGKDYPFPLIDHKERRKLAIARYEFSKEHYRGNI |
| 1IQU Chain:A ((5-390)) | ---LVWHRGDLRLHDHPALLEALARGPVVGLVVLDPNNLKT-TPRRRAWFLENVRALREAYRARGGALWVLEGLPWEKVPEAARRLKA-KAVYALTSHTPYGRYRDGRVR--------EALPVPLHLLPAPHLLPPDLPRAYRVYTPFSRLYRGAAPPLPPPEALPKGP--EEGEIPREDP-------GLPLPEPGEEAALAGLRAFLEAKLPRYAEERDRLDGEGGSRLSPYFALGVLSPRLAAWEA--ERRGGEGARKWVAELLWRDFSYHLLY-HFPWMAERPLDPRFQAFPWQEDEALFQAWYEGKTGVPLVDAAMRELHATGFLSNRARMNAAQFAVKHLLLPWKRCEEAFRHLLLDGDRAVNLQGWQWAGGLGVDAAPYFRVFNPVLQGERHDPEGRWLKRWAPE------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46076 for 3210 contacts (-14.4/contact) +
2D Compatibility (PS) -39830 + (NN) -7492 + (LL) 6680
1D Compatibility (HY) -22800 + (ID) 6400
Total energy: -115918.0 ( -36.11 by residue)
QMean score : 0.377
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