Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSD-DAVAATGVANQILVISIIIYGFISVGVQIIVAQMIGAKKHKEIENVITNGLVVAFLIGIVMSIIFIFMSKNFLTWMGIDPHLVQVGAPFLEIIGGSSVVIAIHASIL-PIL----------------RAHGYVRQSILVPVTISIINVVGNYLFLYGPLAYLDYGVAGVGISTAVANFVGMGLAI-WMLRKYIGYTFHFKKLEQVSKKLLYSILRLGLPSAGENLSYAGSQLVVTAIIAILGTEALTTKVYA--STVSQFVALFAIALGQASQIIIGRAVGAKEIDKAYKQGLRSWKIGLVVAIVVSVSIYLFAEPIMRLFTTNTEIIAMTKELFLLSIFLELGRATNIIIISSLNSTGDVRFPFICGLIVMWIVSLPFSYVLGISAGLGLVGVWLAYIIDEGVRAVLMYRRWRSKVWSLKSVI |
| 4LZ6 Chain:A ((17-353)) | -----------LRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEANQVFGNILTVI----LVLSVIG-FISA--FTLLG----------PALQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFG----LNMGVLGASIATVIAQASVTGLVLRYFLTGKSTLSLHWSDL-RMKGSVIKEVCLVGLPAFVQQSSASLMMIAINSMLLRFGSD-FYVGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQYSRLRETVMLGFKVATIFSIGIFALLMLFPEALLRVFTADREVI------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LZ6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257780 for 2450 contacts (-105.2/contact) +
2D Compatibility (PS) -32074 + (NN) 2197 + (LL) 11524
1D Compatibility (HY) -32000 + (ID) 3900
Total energy: -312033.0 ( -127.36 by residue)
QMean score : 0.127
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