Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGIWYKLIPLFLGIISTISVFFVKEKLVKWILLGFNILLLILIYFVYHIGEIGMF
4WOL Chain:A ((1-33))
--------------------------------------------------------CSTVSPGVLAGIVVGDLVLTVLIALAVYFLGRL---
General information:
TITO was launched using:
RESULT:
Template:
4WOL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13742 for 122 contacts (-112.6/contact) +
2D Compatibility (PS) -3407 + (NN) -2678 + (LL) 4764
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -19413.0 ( -159.12 by residue)
QMean score : 0.189
(partial model without unconserved sides chains):
PDB file :
Tito_4WOL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WOL-query.scw
PDB file :
Tito_Scwrl_4WOL.pdb
: