Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAKYEENFKKSLVALYRR-G-------KTKHSICQEFNVPHSTFGKWIKKFNNEENIES-N--EILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK
2RN7 Chain:A ((3-100))
-KNTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKIGCTPETLRVWVRQHER-DTGGDDGGLTTAERQRLKEPERENRELRRSNDILRLASAYFAKA-----
General information:
TITO was launched using:
RESULT:
Template:
2RN7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13478 for 374 contacts (-36.0/contact) +
2D Compatibility (PS) -8381 + (NN) 3365 + (LL) 396
1D Compatibility (HY) -1200 + (ID) 650
Total energy: -19948.0 ( -53.34 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_2RN7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RN7-query.scw
PDB file :
Tito_Scwrl_2RN7.pdb
: