Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VRKLGLMTILFWMFLSVQAFAADLEPPMISLEKEQRVFTSGEVISFHVKNPEELKIVLVNEHGQRKLLDGETYTVTDWDLDGNYQAEFYQADISKPVVTVEDLFEVKQLEEVAKDETAPSLKMIEITHDEDVLPTSVLYASAELDDAESGVKQAILLVHSKSNESEMELIRNNYTGEFDAEIPLEKFQLGEELTFQLQLVDFAENEITLDLENTIQLYEPKAPVLSYDGSDITNVQKKIGQVGNRIELTLDKYTTEFPELETENGKTIPLLWQKTATEWKGSLALTTELSGEIIHIQEMNQYMLVRATSEPFGDIQLINNSILTGTIHPDFTFISNLYVEVNGQNFPIKRTDNSFTSAEITTTGKITLHWTDWDGQVFS-KQMNQEIKPVIEMPDKETIAPPSVIPKEKESLLTSPDPKPSVESHENTPKKQEKKETSTKNKSSSIPFWIPALMIIGVIIFSGNRAMK |
| 4NNT Chain:A ((71-137)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TIKSESTFKNTEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKREDDKLVVE---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67 for 356 contacts (-0.2/contact) +
2D Compatibility (PS) -7262 + (NN) -3124 + (LL) 28612
1D Compatibility (HY) -800 + (ID) 950
Total energy: 16409.0 ( 46.09 by residue)
QMean score : 0.249
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