Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSV-PDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
3ZKC Chain:A ((2-62))
-IGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLL------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZKC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30272 for 393 contacts (-77.0/contact) +
2D Compatibility (PS) -6360 + (NN) -1700 + (LL) 10340
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -33942.0 ( -86.37 by residue)
QMean score : 0.616
(partial model without unconserved sides chains):
PDB file :
Tito_3ZKC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZKC-query.scw
PDB file :
Tito_Scwrl_3ZKC.pdb
: