Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFDDSKPIYKQIVHYIHTEIVTGTYEAGDKLLSVRELATKLEVNPTTIQRAYAELEETEIIYTVRGTGKYLTEDKRRIEQLENDIAKQLTENFISEMSKLGINKEKIIAWVKKVEEVEVNVSGK
4N0B Chain:A ((16-85))
--------IYQQIYQKLKKEILSRNLLPHSKVPSKRELAENLKVSVNSVNSAYQQLLAEGYLYAIERKGFFVEE---------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4N0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46098 for 431 contacts (-107.0/contact) +
2D Compatibility (PS) -7026 + (NN) -1149 + (LL) 4580
1D Compatibility (HY) -7200 + (ID) 1000
Total energy: -57893.0 ( -134.32 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_4N0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N0B-query.scw
PDB file :
Tito_Scwrl_4N0B.pdb
: