Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDY-FDEEINIPLNRVAKIRGVRTKILGKELLS-NILEIDMISG----VKYQFV--VNKQKKWLEAVSEVLESRGESEKLG
2CAY Chain:A ((48-136))
------------------LQRQRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGF-----LTRSPRLILFFKDPSSSTEFVQLSFRKSDGVLFSQATERALENIL------
General information:
TITO was launched using:
RESULT:
Template:
2CAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39248 for 485 contacts (-80.9/contact) +
2D Compatibility (PS) -8803 + (NN) -585 + (LL) 1952
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -49284.0 ( -101.62 by residue)
QMean score : 0.436
(partial model without unconserved sides chains):
PDB file :
Tito_2CAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CAY-query.scw
PDB file :
Tito_Scwrl_2CAY.pdb
: