Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNKLEFTTIDEYITQAPPETKEV--LQKIRETIKAAAPEATEKISYQMPTFYLEGNLVHFAVAKNHYGFYPASSGIAAFE--SKLGNYKHSKGAVQFPIKEEVPYELIKEMTLFRLAENKQKAAEKLAKKKKK
4GOH Chain:A ((100-173))
-------------ITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGD---LSGGQVIARMMQRHYGVDPEALGFYHFEGIAKLKVYK--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GOH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2475 for 323 contacts (7.7/contact) +
2D Compatibility (PS) -7641 + (NN) -1749 + (LL) 5216
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -7699.0 ( -23.84 by residue)
QMean score : 0.181
(partial model without unconserved sides chains):
PDB file :
Tito_4GOH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GOH-query.scw
PDB file :
Tito_Scwrl_4GOH.pdb
: