Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTETRTEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARAGE-KNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSS-VLKNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDITE |
3NXH Chain:A ((74-331)) | ---------------------------------------------------------------------KKPFSILFMGIEDYATKGQKGRSDSLIVVTLDPKNKTMKMLSIPRDTRVQLA--SKTKINAAYSKGGKDETVETVENFLQ-IPIDKYVTVDFDGFKDVINEVGGIDVDVP-------------EMHLNGEEALAYA---------DFGRNDRQKQILNALIDRMS--------DKIAEKASENVETNIRITEGLALQQIYSGFTSKKIDTLSITGSDLYLG----PNNTYYFEPDATNLEKVRKTLQEHLDYT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 23086 for 1544 contacts (15.0/contact) +
2D Compatibility (PS) -21151 + (NN) 6500 + (LL) 6340
1D Compatibility (HY) 8400 + (ID) 1150
Total energy: 22025.0 ( 14.26 by residue)
QMean score : 0.044
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