Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQKTFIKVTCSILTISDT--RNLDTDTSGQLIQSALETA-----GHEVISRVVVPDDVTLIKQKINELAANGSFCLI-TNGGTGIARRDVTYEALFATIQQEIPGFGEIFRMLSYE-EVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAERQK
1O8Q Chain:A ((8-161))
----------VAILTVSDTVSAGAGPDRSGPRAVSVVDSSSEKLGGAKVVATAVVPDEVERIKDILQKWSDVDEMDLILTLGGTGFTPRDVTPEATKKVIERETPGL--LFVMMQEALKITPFAMLSRSAAGIRGS-TLIINMPGNPNAVAECMEAL-LPALKHALKQ---
General information:
TITO was launched using:
RESULT:
Template:
1O8Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105872 for 1151 contacts (-92.0/contact) +
2D Compatibility (PS) -15641 + (NN) -6517 + (LL) 1440
1D Compatibility (HY) -9200 + (ID) 2700
Total energy: -138490.0 ( -120.32 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_1O8Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O8Q-query.scw
PDB file :
Tito_Scwrl_1O8Q.pdb
: