Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKYFAIFGVVFSMFFSLLLFVTIVFAEEDDTRSSREEMIQQGGLNVSAEVLAHRPMVEKYCKEFGIEEYVNYILAIMQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGCKYFSELLASAESNGCDINTVIQSYNYGGGFINYVASNGKKYSYELAESFSKDKAGGVKVDYPNPIAIPVNGGWRYNYGNQFYVLLVSQYLTPVQFDDETVQAIMNEALKYEGYPYVFGG---SSPS---------TSFDCSGLTQWSYAVAGIQLPRVAQAQYDATQHIPLSEAKAGDLVFFHSTYDAGSYVTHVGIYVGNNQMYHAGDPIGYTNLTDSYWQAHLIGAGRIIK |
| 4Q4G Chain:X ((330-447)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDASGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGPN---GSQ--HVTIYLGNGQMLEAPD------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41973 for 728 contacts (-57.7/contact) +
2D Compatibility (PS) -11485 + (NN) -6892 + (LL) 14716
1D Compatibility (HY) -6400 + (ID) 2000
Total energy: -54034.0 ( -74.22 by residue)
QMean score : 0.408
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