Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VEREELKAIIKQIVADKLSGAETEIPIGVSNRHIHLTETDYNQLFPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARMLGMKIPIRVSGDIEGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVANEFGVKQGDEVSVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTNFAKIIKS |
| 2IVF Chain:A ((872-897)) | -------------------------------------------------------------------------------------------------------------------------------------------PVVHMNSKDAAELGIKDGDMAKLFND---------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9156 for 96 contacts (-95.4/contact) +
2D Compatibility (PS) -2916 + (NN) -947 + (LL) 13624
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -945.0 ( -9.84 by residue)
QMean score : 0.588
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