Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKEITDATFEQETSEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV
2O89 Chain:A ((5-104))
---KVTDADFDSKVESGVQLVDFWATWCGTSKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
General information:
TITO was launched using:
RESULT:
Template:
2O89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52297 for 715 contacts (-73.1/contact) +
2D Compatibility (PS) -10320 + (NN) 642 + (LL) 464
1D Compatibility (HY) -10800 + (ID) 2450
Total energy: -74761.0 ( -104.56 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_2O89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O89-query.scw
PDB file :
Tito_Scwrl_2O89.pdb
: