Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDVQKLTDESIKNIDSITKDKEAEILEV
1EH1 Chain:A ((4-184))
--KELYAETRSHMQKSLEVLEHNLAGLRTGRANPALLLHLKVEYYGAHVPLNQIATVTAPDPRTLVVQSWDQNALKAIEKAIRDSDLGLNPSNKGDALYINIPPLTEERRKDLVRAVRQYAEEGRVAIRNIRREALDKLKKLAKELHLSEDETKRAEAEIQKITDEFIAKADQLAEKKEQEIL--
General information:
TITO was launched using:
RESULT:
Template:
1EH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50042 for 1269 contacts (-39.4/contact) +
2D Compatibility (PS) -19729 + (NN) -8517 + (LL) 476
1D Compatibility (HY) -14000 + (ID) 4250
Total energy: -96062.0 ( -75.70 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_1EH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EH1-query.scw
PDB file :
Tito_Scwrl_1EH1.pdb
: