Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGIIPLWKERGMTSHDCVYKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVNTKELAEISAAELQAALTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDTALNQSNPTFQLEIACGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCL-TLTEI--------DEMMQASDSSFLYPLEKGIESMAKLVIEEEVYAKVLNGGLLPTSLFAEVE-----NEPRAALIFKDKLTAIYKPHPEKKDLWKPEKVIELNQA |
3LWQ Chain:A ((47-301)) | --GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLH------------------GDVPEDKIIQVMKEFEGEIIQR----------LR---------------TRKVYYIEVLEIEGRDVL--------FRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155387 for 1752 contacts (-88.7/contact) +
2D Compatibility (PS) -24331 + (NN) -3194 + (LL) 4188
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -199624.0 ( -113.94 by residue)
QMean score : 0.499
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