Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKD-SVLLQTKKSGVTYFEELNIYNEKKRPIFN-----TKESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATKP-LTTTFYWNDESPEKIMFVTYSPEWNFQIENWDYTLDQLDKIDV----ASPFISW--YGDNLVISNNKDKPD-----------------DELGNLYLQDIRDSATKNLIV---ANIMQFAVHD-NV-LLTIEKNS----DEKLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFDTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELMDNQPILSYETGDLVLY------GYLFDKVIDTKTGKMYNLINTPTKSF |
3PE7 Chain:A ((2-337)) | ------------------------------------------------------AKGKQIPLTF------DTYQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFD-GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYV-KD----GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-NMRK--VKTHA--EGESCTHEFWVPDGSALVYVSYLKG------SPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAENDPFLYVFNMKNGTQHRVAR------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PE7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61963 for 2040 contacts (-30.4/contact) +
2D Compatibility (PS) -29631 + (NN) -1040 + (LL) 5696
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -91538.0 ( -44.87 by residue)
QMean score : 0.268
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