Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSINDKGCEAFISMVQGQVQSYQLDKNSIP--SVADLVSGGYLKANQKSCPNGNSIKIDSSGNVSEKK
1ZWT Chain:A ((4-50))
--------------------------------------SASDSNKSQNAISEVMSATSAINGLYIGQTSYSGLDSTILLNTSAIP------------------------
General information:
TITO was launched using:
RESULT:
Template:
1ZWT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3645 for 180 contacts (20.2/contact) +
2D Compatibility (PS) -4658 + (NN) -505 + (LL) 4604
1D Compatibility (HY) -400 + (ID) 250
Total energy: 2436.0 ( 13.53 by residue)
QMean score : 0.222
(partial model without unconserved sides chains):
PDB file :
Tito_1ZWT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZWT-query.scw
PDB file :
Tito_Scwrl_1ZWT.pdb
: