Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VATKKKTFEEAIAELETIVEALEN---GSASLEDSLDMYQKGIELTKLCQDKLQSAEKRMAKVVTDAGEEIPFEADGE
1H7C Chain:A ((23-84))
----RVMYEKEAKQQEEKIEKMRAEDGENYDIKKQAEILQESRMMIPDCQRRLEAAYLDLQRILEN------------
General information:
TITO was launched using:
RESULT:
Template:
1H7C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1943 for 301 contacts (-6.5/contact) +
2D Compatibility (PS) -6728 + (NN) -5224 + (LL) 932
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -15763.0 ( -52.37 by residue)
QMean score : 0.733
(partial model without unconserved sides chains):
PDB file :
Tito_1H7C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H7C-query.scw
PDB file :
Tito_Scwrl_1H7C.pdb
: