Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKWNVYLTKGEYEPWWFFEEWETSIQEDFSFSDKEAAFLKYQELAEALLSNYPKHQTKKDCLLAAWNEEEVEYCEDCEDDIQTFHGLILFFEGEV----YQPTPEEKETIFKRVLTFA |
3FM8 Chain:C ((68-137)) | ---------------------------------------------------NIPQVSKVKSVRLDAWEEAQVEFMASHGNDAARAR-----FESKVPSFYYRPTPSD------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3251 for 170 contacts (19.1/contact) +
2D Compatibility (PS) -4864 + (NN) 367 + (LL) 6484
1D Compatibility (HY) -2400 + (ID) 850
Total energy: 1988.0 ( 11.69 by residue)
QMean score : 0.433
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