Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTATEALMKMKEKGYKHTDKREFLINLLARKNKYLTAKDVLENMKDDFPGISFDTIYRNLSLFVELGIFEETDLS-GERNFRLACTHEHHHHHFICMKCGKTKEIMMCPMDFLTEALP---GYQIDGHKFEVYGECPECLQAS
3EYY Chain:A ((3-135))
----STDWKSDLRQRGYRLTPQRQLVLEAV-DTLEHATPDDILGEVRKTASGINISTVYRTLELLEELGLVSHAHLGHGAPTYHLA--DRHHHIHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMKHFAIFGRCES-----
General information:
TITO was launched using:
RESULT:
Template:
3EYY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51528 for 866 contacts (-59.5/contact) +
2D Compatibility (PS) -14048 + (NN) -4232 + (LL) 984
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -78624.0 ( -90.79 by residue)
QMean score : 0.468
(partial model without unconserved sides chains):
PDB file :
Tito_3EYY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYY-query.scw
PDB file :
Tito_Scwrl_3EYY.pdb
: