Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPKHKLGD-FMVKI---ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQTPVFLLINKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIGKQGQMLKQIGMRARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGFDREEY |
| 2HJG Chain:A ((6-166)) | ---------VAIVGRPNVGKSTIFNRIAGERIS-----------RIYSSAEWLNYDFNLID-------------PFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLD--N-----NIYDFYS--LGFGEPYPISGTHGLGLGDLLD---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -115609 for 918 contacts (-125.9/contact) +
2D Compatibility (PS) -13142 + (NN) -4165 + (LL) 12900
1D Compatibility (HY) -10800 + (ID) 2250
Total energy: -133066.0 ( -144.95 by residue)
QMean score : 0.553
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