Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAEEHNHNHEEENIIWITNEE-GKEEAY--EILFDFDSEDFDKSYVLYFPAGK-----GEDEEIEILASSYIQDEEGKQGQLKPVETDEEWDMIEEILATFLADEDEE-
1D2E Chain:A ((295-397))
------HQKVEAQVYILTKEEGGRHKPFVSHFMPVMFSLTWDMACRIILPPGKELAMPGEDLKLTLILRQPMILEKGQRFTLRDGNRTIGTGLVTDTPAMTEEDKNIKW
General information:
TITO was launched using:
RESULT:
Template:
1D2E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 30552 for 668 contacts (45.7/contact) +
2D Compatibility (PS) -9714 + (NN) 1602 + (LL) 524
1D Compatibility (HY) -4400 + (ID) 950
Total energy: 17614.0 ( 26.37 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_1D2E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D2E-query.scw
PDB file :
Tito_Scwrl_1D2E.pdb
: