Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDE--FVHMLVGQEIEGVRRRGKFLLFDLTNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK |
3SAV Chain:A ((1-273)) | -PELPEVETIRRTLLPLIVGKTIEDVRIFWPN-IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDCTVVAGFGNIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVM---------------------HLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113126 for 1995 contacts (-56.7/contact) +
2D Compatibility (PS) -26542 + (NN) -8288 + (LL) 1060
1D Compatibility (HY) -21200 + (ID) 5950
Total energy: -174046.0 ( -87.24 by residue)
QMean score : 0.457
|
|
|