Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKALEEKQIPIMTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLSVIRYHK--------FLGQLIDGYTSIA-------------ITGSHGKTSTTGLLSHVVGAIRPTSYLIGDGTGS---------GTKDAEYFALEACEYQR---HFLA--YKPTYAIMTNIDWDHPDYFKSVDDVFNAFETL--GKQVKKAVFALGDDAELRKLTLDIPIIYFGFGEENEFQAKNVIKETTGTKFDVYHREEFL-SSFEIPAYGDHNVLNALSVIALCDYEGLPVEDVKNELKTFEGVKRR--FSITEKGNQVLVDDYAHHPSEIRATVNAARQKYPDKKVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKGNHIIKEEHTEELLKYPEAVILFMGAGDVQKFQAAYEKVLDHEFLTEADLKKSAIN |
| 3ZM5 Chain:A ((10-333)) | --------------------------QVVGAKNDISIFEDTQLEKAE-----FDSRLIGTGDLFVPLKGARDGHDFIETAFENGAAVTLSEKEVSNHPYILVDDVLTAFQSLASYYLEKTTVDVFAVTGSNGKTTTKDMLAHLLSTRYKTYKTQGNYNNEIGLPYTVLHMPEGTEKLVLEMGQDHLGDIHLLSELARPKTAIVTLVGEAHLAFFKDRSEIAKGKMQIADGMASGSLLLAPADPIVEDYLPIDKKVVRFGQGAELE------ITDLVERKDSLTFKANFLEQALDLPVTGKYNATNAMIASYVALQEGVSEEQIRLAFQHLELTRNRTEWKKAANGADILSDVYNANPTAMK------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87790 for 2078 contacts (-42.2/contact) +
2D Compatibility (PS) -30146 + (NN) -11505 + (LL) 12608
1D Compatibility (HY) -6800 + (ID) 3650
Total energy: -127283.0 ( -61.25 by residue)
QMean score : 0.381
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