Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEEILAQKEVEVAKMPLEQVAEKRKTYSFYEFLKANTNTMQLIAEVKRASPSKGEINMGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKNVGIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEKLITLFEQALALDLEVLVEVHDQEELAVAQKIGAQLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFRTAEDVARVSQKYDAVLVGEALMREATPEVAAKSLKVTR
1JCM Chain:P ((36-240))
----------------------------TRHFYDALQGARTA--FILECKKASPSKGVIRDDFDPARIAAIYKHY-ASAISVLTDEKYFQGSFNFLPIVSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAKVVGINNRDLCDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSHFANGFLIGSALM----------------
General information:
TITO was launched using:
RESULT:
Template:
1JCM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154116 for 1753 contacts (-87.9/contact) +
2D Compatibility (PS) -22591 + (NN) -7879 + (LL) 5040
1D Compatibility (HY) -15600 + (ID) 3900
Total energy: -199046.0 ( -113.55 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_1JCM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JCM-query.scw
PDB file :
Tito_Scwrl_1JCM.pdb
: