Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFSMEKGL-DYVMESFSDCLLQKEP----FALKESATWSDD--EWYLDQENRNFIPNE----GLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIEDDFMTIPETFDRDLESLLSQPGADEIEGMVIGRFQQKTAMTAEKLAYIIETKTALQK-IPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH |
| 3TLY Chain:A ((35-354)) | LLAAPLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGGDNSNSLLPFLDYDAIIANPKIIIGYADTTALLAGIYAKTGLITFYGPALIPSFGEHPPLVDITYESFIKILTRKQSGIYTYTLPEK--WSDESINW---NENKILRPKKLYKNNCAFYGSGKVEGRVIGGNLATLTGIWGSEWMPEIRNGDILFIEDSRASI-ATVERLFSMLKLNRVFDKVSAIILGKHELFDCAGSKRRPYEVLTEVLDGKQIPVLDGFDCSHTHPMLTLPLGVKLAID------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TLY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186760 for 2651 contacts (-70.4/contact) +
2D Compatibility (PS) -31978 + (NN) -7585 + (LL) 1256
1D Compatibility (HY) -21200 + (ID) 5600
Total energy: -251867.0 ( -95.01 by residue)
QMean score : 0.466
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