Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ISKDMLVNDGIRAREVRLIDQ-DGEQLGVKSKIDALQIAEKANLDLVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAPLHEK |
2HC5 Chain:A ((60-99)) | ----FELHDKLNEYYVKVIEDSTNEVIREIPPKRWLDFYAAMTE-------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HC5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5024 for 193 contacts (26.0/contact) +
2D Compatibility (PS) -4134 + (NN) -1986 + (LL) 9932
1D Compatibility (HY) -2000 + (ID) 250
Total energy: 6586.0 ( 34.12 by residue)
QMean score : 0.247
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