Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNGKVKWFNNEKGYGFIESDGGEDIFVHFTAIQGDGYKSLEEGQAVTFEVVEGNRGAQAANVEKA
3PF5 Chain:A ((1-65))
MLEGKVKWFNSEKGFGFIEVEGQDDVFVHFSAIQGEGFKTLEEGQAVSFEIVEGNRGPQAANVTK-
General information:
TITO was launched using:
RESULT:
Template:
3PF5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22513 for 436 contacts (-51.6/contact) +
2D Compatibility (PS) -6639 + (NN) -936 + (LL) 144
1D Compatibility (HY) -7600 + (ID) 2400
Total energy: -39944.0 ( -91.61 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_3PF5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PF5-query.scw
PDB file :
Tito_Scwrl_3PF5.pdb
: